digest - Create Compact Hash Digests of R Objects

Implementation of a function 'digest()' for the creation of hash digests of arbitrary R objects (using the 'md5', 'sha-1', 'sha-256', 'crc32', 'xxhash', 'murmurhash', 'spookyhash', 'blake3', 'crc32c', 'xxh3_64', and 'xxh3_128' algorithms) permitting easy comparison of R language objects, as well as functions such as'hmac()' to create hash-based message authentication code. Please note that this package is not meant to be deployed for cryptographic purposes for which more comprehensive (and widely tested) libraries such as 'OpenSSL' should be used.

Last updated 16 days ago

hash-digest

111 stars 19.75 score 0 dependencies 6445 dependents

rticles - Article Formats for R Markdown

A suite of custom R Markdown formats and templates for authoring journal articles and conference submissions.

Last updated 4 months ago

articlejournalpaperrmarkdown

1.5k stars 11.53 score 26 dependencies 2 dependents

git2rdata - Store and Retrieve Data.frames in a Git Repository

The git2rdata package is an R package for writing and reading dataframes as plain text files. A metadata file stores important information. 1) Storing metadata allows to maintain the classes of variables. By default, git2rdata optimizes the data for file storage. The optimization is most effective on data containing factors. The optimization makes the data less human readable. The user can turn this off when they prefer a human readable format over smaller files. Details on the implementation are available in vignette("plain_text", package = "git2rdata"). 2) Storing metadata also allows smaller row based diffs between two consecutive commits. This is a useful feature when storing data as plain text files under version control. Details on this part of the implementation are available in vignette("version_control", package = "git2rdata"). Although we envisioned git2rdata with a git workflow in mind, you can use it in combination with other version control systems like subversion or mercurial. 3) git2rdata is a useful tool in a reproducible and traceable workflow. vignette("workflow", package = "git2rdata") gives a toy example. 4) vignette("efficiency", package = "git2rdata") provides some insight into the efficiency of file storage, git repository size and speed for writing and reading.

Last updated 29 days ago

reproducible-researchversion-control

98 stars 9.54 score 3 dependencies 3 dependents

git2rdata - Store and Retrieve Data.frames in a Git Repository

The git2rdata package is an R package for writing and reading dataframes as plain text files. A metadata file stores important information. 1) Storing metadata allows to maintain the classes of variables. By default, git2rdata optimizes the data for file storage. The optimization is most effective on data containing factors. The optimization makes the data less human readable. The user can turn this off when they prefer a human readable format over smaller files. Details on the implementation are available in vignette("plain_text", package = "git2rdata"). 2) Storing metadata also allows smaller row based diffs between two consecutive commits. This is a useful feature when storing data as plain text files under version control. Details on this part of the implementation are available in vignette("version_control", package = "git2rdata"). Although we envisioned git2rdata with a git workflow in mind, you can use it in combination with other version control systems like subversion or mercurial. 3) git2rdata is a useful tool in a reproducible and traceable workflow. vignette("workflow", package = "git2rdata") gives a toy example. 4) vignette("efficiency", package = "git2rdata") provides some insight into the efficiency of file storage, git repository size and speed for writing and reading.

Last updated 29 days ago

reproducible-researchversion-control

98 stars 9.54 score 3 dependencies 3 dependents

qrcode - Generate QRcodes with R

Create static QR codes in R. The content of the QR code is exactly what the user defines. We don't add a redirect URL, making it impossible for us to track the usage of the QR code. This allows to generate fast, free to use and privacy friendly QR codes.

Last updated 5 days ago

qrcodeqrcode-generatorr-project

40 stars 7.34 score 1 dependencies 6 dependents

checklist - A Thorough and Strict Set of Checks for R Packages and Source Code

An opinionated set of rules for R packages and R source code projects.

Last updated 3 months ago

checklistcontinuous-integrationcontinuous-testingquality-assurance

16 stars 6.94 score 113 dependencies 2 dependents

checklist - A Thorough and Strict Set of Checks for R Packages and Source Code

An opinionated set of rules for R packages and R source code projects.

Last updated 3 months ago

checklistcontinuous-integrationcontinuous-testingquality-assurance

16 stars 6.94 score 113 dependencies 2 dependents

INBOtheme - Themes for ggplot2

Several themes for the ggplot2 package. Among others themes complying with the style guide for the Research Institute for Nature and Forest (INBO) and Elsevier journals.

Last updated 2 years ago

ggplot2ggplot2-themes

3 stars 5.17 score 33 dependencies

INBOtheme - Themes for ggplot2

Several themes for the ggplot2 package. Among others themes complying with the style guide for the Research Institute for Nature and Forest (INBO) and Elsevier journals.

Last updated 2 years ago

ggplot2ggplot2-themes

3 stars 5.17 score 33 dependencies

effectclass - Classification and Visualisation of Effects

Classify effects by comparing the confidence intervals with thresholds.

Last updated 4 months ago

effect-sizefan-chart

6 stars 5.09 score 71 dependencies

effectclass - Classification and Visualisation of Effects

Classify effects by comparing the confidence intervals with thresholds.

Last updated 4 months ago

effect-sizefan-chart

6 stars 5.09 score 71 dependencies

INBOmd - Markdown Templates for INBO

Several templates to generate reports, presentations and posters.

Last updated 9 months ago

bookdownrmarkdownxelatex

11 stars 4.78 score 121 dependencies

INBOmd - Markdown Templates for INBO

Several templates to generate reports, presentations and posters.

Last updated 9 months ago

bookdownrmarkdownxelatex

11 stars 4.74 score 121 dependencies

inlatools - Diagnostic Tools for INLA Models

Several functions which can be useful to choose sensible priors and diagnose the fitted model.

Last updated 19 hours ago

bayesian-statisticsgplv3inlamixed-modelsmodel-checkingmodel-validation

4 stars 4.40 score 52 dependencies

inlatools - Diagnostic Tools for INLA Models

Several functions which can be useful to choose sensible priors and diagnose the fitted model.

Last updated 19 hours ago

bayesian-statisticsgplv3inlamixed-modelsmodel-checkingmodel-validation

4 stars 4.40 score 52 dependencies

multimput - Using Multiple Imputation to Address Missing Data

Accompanying package for the paper: Working with population totals in the presence of missing data comparing imputation methods in terms of bias and precision. Published in 2017 in the Journal of Ornithology volume 158 page 603–615 (<doi:10.1007/s10336-016-1404-9>).

Last updated 18 hours ago

imputationimputation-model

1 stars 3.32 score 48 dependencies 1 dependents

multimput - Using Multiple Imputation to Address Missing Data

Accompanying package for the paper: Working with population totals in the presence of missing data comparing imputation methods in terms of bias and precision. Published in 2017 in the Journal of Ornithology volume 158 page 603–615 (<doi:10.1007/s10336-016-1404-9>).

Last updated 18 hours ago

imputationimputation-model

1 stars 3.32 score 48 dependencies 1 dependents

n2kanalysis - Generic Functions to Analyse Data from the 'Natura 2000' Monitoring

All generic functions and classes for the analysis for the 'Natura 2000' monitoring. The classes contain all required data and definitions to fit the model without the need to access other sources. Potentially they might need access to one or more parent objects. An aggregation object might for example need the result of an imputation object. The actual definition of the analysis, using these generic function and classes, is defined in dedictated analysis R packages for every monitoring scheme. For example 'abvanalysis' and 'watervogelanalysis'.

Last updated 8 months ago

analysismonitoringnatura2000

1 stars 3.18 score 62 dependencies

grtsdb - Create a Sampling Frame Using GRTS

Create an SQLite database containing the sampling framework for different levels of resolution. Take a sample from this framework.

Last updated 3 years ago

grtssamplingsampling-methodssqlite

1 stars 2.70 score 17 dependencies

grtsdb - Create a Sampling Frame Using GRTS

Create an SQLite database containing the sampling framework for different levels of resolution. Take a sample from this framework.

Last updated 3 years ago

grtssamplingsampling-methodssqlite

1 stars 2.70 score 17 dependencies

n2khelper - Auxiliary Functions for the Analysis and Reporting of the Natura 2000 Monitoring

Auxiliary functions for analysing Natura 2000 monitoring data.

Last updated 3 years ago

natura2000

2.18 score 36 dependencies 1 dependents

territoria - Clustering Observations from Breeding Birds into Territoria

Clusters individual observations based on breeding indication and distance between observations.

Last updated 1 years ago

birdbreedingclusterhome-rangeterritory

1.70 score 27 dependencies

territoria - Clustering Observations from Breeding Birds into Territoria

Clusters individual observations based on breeding indication and distance between observations.

Last updated 1 years ago

birdbreedingclusterhome-rangeterritory

1.70 score 27 dependencies

ladybird - Analysis of Ladybird Occurrence Data

Analysis of ladybird occurrence data from Belgium, the Netherlands and the UK since 1990.

Last updated 4 years ago

1.70 score 97 dependencies

ladybird - Analysis of Ladybird Occurrence Data

Analysis of ladybird occurrence data from Belgium, the Netherlands and the UK since 1990.

Last updated 4 years ago

1.70 score 97 dependencies

n2kupdate - Auxiliary Functions to Update the n2kresult Database

The functions are useful to store the results from https:// github.com/inbo/n2kanalysis into a PostgreSQL database created with https:// github.com/inbo/n2kresult.

Last updated 6 years ago

etlnatura2000

1.70 score 25 dependencies

lipsum - Generate dummy text

Functions that generate dummy text. This is useful when developping a corporate identity for documents.

Last updated 6 years ago

lipsumtypography

1.36 score 0 dependencies